rs3762969 chr5:176575872 C>T

Sequence
aggccccaccacccctgtcagaac[C/T]ctgctctctaacctctggcctttg
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.50 n/a 0.021.00 1.50 3.08 Discordant
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Motif analysis

HNF4A_HUMAN Discordant
HNF4A_HUMAN pic

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia,  Whole_Blood

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