rs3763497 chr7:45885749 C>T
- Sequence
tgcacaactatccagggcggagta[C/T]actgcctggcacacagcaggtggc
- ASB in cell types
- A549 (lung carcinoma) NUGC4 (Signet ring cell gastric adenocarcinoma)
- ASB for transcription factors
- HNF4A_HUMAN GCR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 1.52 | -1.84 | 2.33 | -1.97 | Weak Concordant | |||
| GCR_HUMAN | 1.78 | 0.41 | 2.00 | -6.72 | Concordant | |||
| EP300_HUMAN | 1.58 | 0.05 | 2.00 | n/a | n/a |
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Motif analysis
