rs3763745 chr10:59908581 A>C

Sequence
aattaactctctcttagcgtcacc[A/C]caaaactaaccgccttggaaaggc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN PRD10_HUMAN ELF4_HUMAN P66B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.19 -2.23 1.3·10-31.00 1.25 n/a n/a
PRD10_HUMAN 2.20 -1.96 1.9·10-31.00 1.00 n/a n/a
ELF4_HUMAN 2.59 -2.46 0.031.00 1.00 n/a No Hit
P66B_HUMAN 2.61 -2.35 0.031.00 1.00 n/a n/a
NRF1_HUMAN 2.10 0.11 0.031.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI heel bone mineral density
GRASP birth weight,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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