rs3763839 chr11:60952133 C>G

Sequence
tctcagtcccctgcagccctcccc[C/G]caggctcagcctctgtccctctct
ASB in cell types
CD14+ monocytes MDM(monocyte derived macrophages) macrophages form periferal blood
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN TF65_HUMAN
Search SNPs nearby
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.23 -3.86 1.9·10-51.00 2.00 n/a No Hit
SPI1_HUMAN 1.72 0.36 5.8·10-51.00 1.65 n/a No Hit
TF65_HUMAN 2.67 n/a 2.3·10-31.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Colon_Transverse,  Lung,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid,  Whole_Blood

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