rs3764942 chr5:136133811 C>T
- Sequence
ccatgtggcgcgcccgtcttaagt[C/T]tgagcatgctcagtagccaaaaca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | -0.65 | 2.21 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, diabetic retinopathy in type 2 diabetes mellitus, height, homa-b, maternal transmission distortion, recurrent early onset major depressive disorder, recurrent early onset major depressive disorder (females), recurrent early onset major depressive disorder (males), transmission distortion, triglycerides change with statins
GTEx eQTL Breast_Mammary_Tissue, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid