rs3765562 chr6:131652792 C>G

Sequence
gaatctttagttactctgtctgtg[C/G]tgcagcaagtatcaagattttgat
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.92 0.34 1.7·10-31.00 1.83 -3.09 Concordant
Items per page:
1 – 1 of 1

Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP body mass index (bmi),  diabetic retinopathy in type 2 diabetes mellitus,  fasting blood glucose,  hdl cholesterol,  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Whole_Blood

Download