rs3765962 chr1:9067399 T>A
- Sequence
gcctctcgcatgtggccatctgaa[T/A]catttcctttcgcaatgtgttact
- ASB in cell types
- CD14+ monocytes tibial nerve SUM159PT (Triple negative breast cancer) NB4 (acute promyelocytic leukemia )
- ASB for transcription factors
- STAT1_HUMAN EP300_HUMAN CEBPB_HUMAN MYC_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.73 | n/a | 3.00 | -1.85 | Weak Concordant | |||
| EP300_HUMAN | 2.39 | -3.75 | 1.33 | n/a | n/a | |||
| CEBPB_HUMAN | 1.71 | 0.94 | 1.38 | n/a | No Hit | |||
| MYC_HUMAN | 2.74 | -5.07 | 2.00 | n/a | No Hit |
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Motif analysis
