rs3766377 chr1:160830769 A>G

Sequence
ggccaactggccagaggtaaaggt[A/G]tgagatgcagggagaaagtttttt
ASB in cell types
THP-1 (acute monocytic leukemia) erythroid progenitors

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
THP-1 (acute monocytic leukemia) 0.86 0.12 0.011.00 2.00
erythroid progenitors 1.87 n/a 0.041.00 2.50
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  left ventricular systolic dimensions (lv systolic dimensions),  paternal transmission distortion,  psoriasis,  rheumatoid arthritis
GTEx eQTL Skin_Sun_Exposed_Lower_leg,  Thyroid

Download