rs3766379 chr1:160837925 T>C

Sequence
aggcgagaggctcctggaggagcc[T/C]actcaggctggtgggctttgtgcc
ASB for transcription factors
STAG1_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.25 0.11 3.3·10-31.00 1.09 n/a n/a
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Motif analysis

No data available

Genetic associations

ClinVar rheumatoid arthritis
GTEx eQTL Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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