rs3766742 chr1:12005113 A>G

Sequence
gtttgctttttgagacagagtcgc[A/G]ctccgtaacccaggctggagtgca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PAX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN n/a 1.85 1.007.0·10-4 2.00 3.05 Concordant
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Motif analysis

PAX2_HUMAN Concordant
PAX2_HUMAN pic

Genetic associations

GRASP ldl cholesterol,  triglycerides change with statins,  waist hip ratio
GTEx eQTL Nerve_Tibial,  Thyroid

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