rs3767446 chr1:167746504 G>A

Sequence
aagagtgaagacaatacatatgtc[G/A]aataagatctctagcacagagttc
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.73 0.34 0.031.00 1.36 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  homa-b,  irritible bowel syndrome,  urinary albumin-to-creatinine ratio,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Pituitary,  Thyroid

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