rs376757 chr6:149461772 A>G

Sequence
agtagatatttgactatcgatgtt[A/G]gaagtgcaccaaggaaacgtgtct
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -3.56 2.74 1.002.9·10-5 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP college completion,  parkinsons disease
GTEx eQTL Brain_Cortex,  Heart_Atrial_Appendage,  Skin_Not_Sun_Exposed_Suprapubic

Download