rs376900 chr20:56451479 G>A

Sequence
cgccgtgtcagggggatgcatagg[G/A]gtttggtggatggaaaagaaaggg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.62 1.52 1.001.1·10-7 3.40
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  ldl cholesterol,  multiple sclerosis (females),  waist hip ratio
GTEx eQTL Artery_Tibial,  Esophagus_Mucosa,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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