rs3769210 chr2:173050047 T>C

Sequence
aaccataaaataatatgctttgtt[T/C]tatgagcttctttggaagtaaatc
ASB in cell types
HEK293 (embryonic kidney) PANC1 (pancreatic ductal adenocarcinoma)
ASB for transcription factors
PRDM6_HUMAN FEZF1_HUMAN FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM6_HUMAN 2.55 n/a 3.5·10-51.00 1.50 n/a No Hit
FEZF1_HUMAN 2.73 -4.27 0.011.00 1.33 n/a No Hit
FOXA2_HUMAN 1.45 -0.39 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hip bone mineral density (bmd),  obesity with early age of onset (age >2),  schizophrenia,  total cholesterol
GTEx eQTL Artery_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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