rs3769763 chr2:20050626 G>C

Sequence
gaaaaaatcacaaacttattacta[G/C]tgaatcaccaggcaacaacagtgt
ASB in cell types
K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.54 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  height,  ldl cholesterol,  serum creatinine,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Pituitary,  Testis,  Thyroid

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