rs3770090 chr2:86036165 C>T
- Sequence
tctgaacgcgcctggcaacagctc[C/T]accacctgctgtttggaaagtcag
- ASB in cell types
- foreskin keratinocyte RH4 (alveolar rhabdomyosarcoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.09 | 0.21 | 1.48 | -0.98 | Weak Concordant | |||
| RAD21_HUMAN | 1.98 | -0.45 | 1.22 | n/a | n/a |
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Motif analysis
