rs3770455 chr2:171811385 G>A

Sequence
ggcagtattaactttctaaccctc[G/A]tgattatcaggctctattactttt
ASB in cell types
A549 (lung carcinoma) upper lobe of left lung

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 0.21 0.88 1.005.1·10-3 2.04
upper lobe of left lung -1.64 2.19 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  barnes akathisia rating scale,  homa-b,  myopia,  refractive error,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Skin_Sun_Exposed_Lower_leg

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