rs3770473 chr2:216634116 T>G

Sequence
actgttgctagcgggacgcggaag[T/G]caggcccggggaggggaactggag
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.59 0.15 1.9·10-61.00 1.23 -1.82 Weak Concordant
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP body mass index (bmi),  obesity with early age of onset (age >2),  simpson-angus scale
GTEx eQTL Colon_Transverse,  Whole_Blood

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