rs3770521 chr2:216115437 G>A
- Sequence
agattaccttgccttaagatggat[G/A]cttgtctaggcggcagatacctgc
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) liver 22RV1 (prostate carcinoma)
- ASB for transcription factors
- TYY1_HUMAN SPT5H_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 2.11 | -0.82 | 1.00 | -0.81 | Weak Concordant | |||
| SPT5H_HUMAN | 1.95 | 0.11 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.56 | 0.29 | 2.00 | n/a | No Hit |
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Motif analysis
