rs3772841 chr3:124835283 C>A
- Sequence
acagctcacagcagaaggcagagc[C/A]aggaaaccacggagtcctgcactt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12891 (male B- cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ANDR_HUMAN ZN687_HUMAN MNT_HUMAN IRF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -1.14 | 2.63 | 1.83 | n/a | No Hit | |||
| ZN687_HUMAN | 2.83 | 0.19 | 1.00 | n/a | n/a | |||
| MNT_HUMAN | 2.21 | -1.88 | 1.00 | n/a | No Hit | |||
| IRF5_HUMAN | -2.10 | 2.08 | 1.00 | 1.22 | Weak Concordant |
Items per page:
1 – 4 of 4
Motif analysis
