rs3773743 chr3:53236153 G>T

Sequence
tccccttaccctgcccagtgtcta[G/T]ctgtgtagccctaggaaatgaggc
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.38 0.03 8.3·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin,  homa-ir,  mitral annular calcium,  total cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Brain_Spinal_cord_cervical_c-1,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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