rs3774300 chr3:187741991 C>T
- Sequence
ccctccccccaccaaaaaaaaaaa[C/T]cttagaaccacgttgcctattata
- ASB in cell types
- foreskin keratinocyte 22RV1 (prostate carcinoma) thoracic aorta CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ANDR_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -5.22 | 2.89 | 2.00 | 0.20 | Weak Concordant | |||
| CTCF_HUMAN | 0.63 | 1.03 | 1.16 | n/a | No Hit |
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Motif analysis
