rs3775704 chr4:142405698 G>A

Sequence
tgaaagttgatttgggccatatct[G/A]ggaaactttggtgttccttattga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
REQU_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN 1.94 -1.70 0.021.00 1.00 n/a n/a
IKZF1_HUMAN 0.99 -0.14 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal,  Testis

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