rs3776474 chr5:74638306 A>G
- Sequence
ccccaaccagatgtgagccccact[A/G]taagactgcacagaaaaccacaaa
- ASB in cell types
- BEAS-2B (bronchial epithelium) HCASMC (Human coronary artery smooth muscle cells) HS-ES-2M (Epithelioid sarcoma) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- GCR_HUMAN TCF21_HUMAN SMRC1_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.59 | 2.13 | 2.00 | n/a | No Hit | |||
| TCF21_HUMAN | n/a | 2.89 | 2.00 | n/a | No Hit | |||
| SMRC1_HUMAN | -2.52 | 2.62 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -1.74 | 2.05 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4