rs3776478 chr5:74639529 C>A

Sequence
cgcacccttctccaggttttgaac[C/A]tgatctcaatccaatcaaaagaga
ASB in cell types
22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium)
ASB for transcription factors
ANDR_HUMAN GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -1.14 2.89 0.981.3·10-3 2.00 n/a No Hit
GCR_HUMAN -0.37 1.35 1.007.0·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis

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