rs3776991 chr5:154405342 T>C
- Sequence
gggtgggagctgagctccgggaag[T/C]gtcaggggccgcgtggagggaaag
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line) foreskin keratinocyte erythroid cells
- ASB for transcription factors
- ELF1_HUMAN JUN_HUMAN CDN1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 2.59 | 0.40 | 1.44 | -0.73 | Weak Concordant | |||
| JUN_HUMAN | 0.40 | 1.33 | 2.10 | n/a | No Hit | |||
| CDN1B_HUMAN | 0.41 | 1.14 | 2.00 | n/a | n/a |
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Motif analysis
