rs3777519 chr6:89298306 C>T
- Sequence
taaattaatttcttaatcccttaa[C/T]agtcacacaagaggaaggtctggc
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) AML (monocytes and acute myeloid leukemia)
- ASB for transcription factors
- MYB_HUMAN TCF21_HUMAN TF65_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYB_HUMAN | 1.56 | -0.62 | 1.00 | -5.27 | Concordant | |||
| TCF21_HUMAN | 1.11 | n/a | 2.50 | n/a | No Hit | |||
| TF65_HUMAN | 1.63 | 0.11 | 2.00 | n/a | No Hit |
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Motif analysis
