rs3779130 chr7:140006043 C>T
- Sequence
agacggaggaactaggcctcccag[C/T]gcctgtaactggaacgttggcggc
- ASB in cell types
- K562 (myelogenous leukemia) HCT-116 (colon carcinoma) HEK293 (embryonic kidney) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.57 | 1.32 | 1.51 | n/a | No Hit | |||
| RAD21_HUMAN | 0.34 | 1.00 | 1.44 | n/a | n/a | |||
| STAG1_HUMAN | 0.41 | 1.33 | 1.00 | n/a | n/a |
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