rs3779159 chr7:42152648 T>C
- Sequence
cattaaatcaaactaatgtcaccc[T/C]atcacaatcagcctgagagaagga
- ASB in cell types
- HEK293 (embryonic kidney) breast tumor primary breast cancer
- ASB for transcription factors
- PRDM4_HUMAN ZN610_HUMAN ESR1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRDM4_HUMAN | 1.75 | -1.75 | 1.00 | n/a | No Hit | |||
| ZN610_HUMAN | 2.69 | -2.37 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.23 | 0.38 | 1.88 | -2.01 | Concordant | |||
| ANDR_HUMAN | 1.46 | 0.52 | 2.00 | n/a | No Hit | |||
| GLI2_HUMAN | 2.00 | -1.70 | 1.00 | n/a | No Hit |
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Motif analysis
