rs3781687 chr11:77091391 G>C
- Sequence
ttgggatggaactagctcaggagc[G/C]cctgctggagtggaggcaggcaga
- ASB in cell types
- adult erythroblasts GM02255 (Lymphoblastoid Cell Lines) liver epidermal keratinocytes
- ASB for transcription factors
- CTCF_HUMAN KDM6A_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 0.41 | 1.26 | 0.47 | Weak Discordant | |||
| KDM6A_HUMAN | 2.58 | n/a | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.54 | -0.00 | 1.30 | n/a | n/a |
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Motif analysis
