rs3783313 chr14:34873632 A>C
- Sequence
ttgtcttaaccccctcccccaaca[A/C]cctccaccgcgcttcccggctatg
- ASB in cell types
- adult erythroblasts J-Lat A72 MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- RBBP5_HUMAN SMCA4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | n/a | 2.15 | 4.00 | n/a | n/a | |||
| SMCA4_HUMAN | -0.30 | 1.70 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.26 | 0.84 | 1.06 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood