rs3783492 chr19:2475291 A>C
- Sequence
ttcccctcaacaatggctttctcc[A/C]gggcctggaggcctccgcacgggc
- ASB in cell types
- breast tumor
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -1.86 | 2.66 | 2.00 | -1.92 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Skin_Not_Sun_Exposed_Suprapubic, Thyroid