rs3783510 chr19:2478755 A>C
- Sequence
ggcttccccagggagtgccccccc[A/C]gcccaccacagccttctccatccc
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ESR1_HUMAN GCR_HUMAN ANDR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.98 | -5.49 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.28 | 0.32 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.21 | -4.82 | 2.50 | n/a | No Hit | |||
| STAT1_HUMAN | 2.27 | n/a | 4.00 | n/a | No Hit |
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