rs3785019 chr16:84088829 C>G

Sequence
tgcccaagcagaaaaaaccacacc[C/G]accacaagctgggctgccgtgatc
ASB in cell types
spleen
ASB for transcription factors
RUNX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RUNX2_HUMAN -3.59 2.10 1.000.02 1.50 2.14 Concordant
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Motif analysis

RUNX2_HUMAN Concordant
RUNX2_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  adiponectin levels,  total cholesterol,  triglycerides,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Esophagus_Mucosa,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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