rs3785185 chr16:10183677 G>A
- Sequence
gggaacccactcctctgatctcag[G/A]gagccagaatcctaaaagcaaaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) bipolar neuron
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.01 | 2.25 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, hdl cholesterol, triglycerides change with statins