rs3786677 chr19:50507360 C>T
- Sequence
ctccccctgacccaacacatccaa[C/T]ggcctactcagcattcacccagta
- ASB in cell types
- U2OS (osteosarcoma)
- ASB for transcription factors
- DTL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DTL_HUMAN | 2.51 | -4.75 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, diastolic blood pressure (dbp), ldl cholesterol, rheumatoid arthritis, systolic blood pressure (sbp), total cholesterol
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial