rs380821 chr6:2862707 C>T

Sequence
ggtcttcccacagtattcagcaca[C/T]aggagtacccaagacatttgtgta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 3.42 n/a 1.7·10-51.00 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP parkinsons disease (pd)
GTEx eQTL Artery_Aorta,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Thyroid,  Whole_Blood

Download