rs380855 chr3:11185735 G>A
- Sequence
cctgggggagctccgatgacacag[G/A]ccaatagtggtgatggtgtttgta
- ASB in cell types
- HKC8 (kidney proximal tubule cell line) A549 (lung carcinoma) breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- EPAS1_HUMAN ESR1_HUMAN ANDR_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EPAS1_HUMAN | 1.77 | -1.00 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.67 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.94 | -1.15 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.73 | n/a | 3.00 | n/a | No Hit | |||
| STAG2_HUMAN | -1.15 | 1.58 | 1.00 | n/a | n/a |
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