rs381429 chr1:16604860 T>A
- Sequence
tggcattaacattggattcccaac[T/A]agtaaatcttaccaagatctgact
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) HEK293 (embryonic kidney) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN HXB13_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.40 | -0.62 | 2.12 | n/a | No Hit | |||
| HXB13_HUMAN | 3.01 | -3.10 | 1.00 | -3.51 | Concordant | |||
| BRD4_HUMAN | 1.74 | -4.48 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
