rs3828083 chr1:26432257 G>A
- Sequence
caggcgcagggcagggtcccctca[G/A]tttgggtgacggaaggggcgtgtc
- ASB in cell types
- MDA-MB-134 (invasive lobular breast carcinoma) HEK293 (embryonic kidney) CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- MAX_HUMAN RBBP5_HUMAN STAT1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAX_HUMAN | 1.39 | 0.50 | 1.19 | n/a | No Hit | |||
| RBBP5_HUMAN | -3.07 | 2.02 | 1.50 | n/a | n/a | |||
| STAT1_HUMAN | n/a | 2.58 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -3.59 | 2.72 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | 0.36 | 1.42 | 1.30 | n/a | No Hit |
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