rs383228 chr1:40391858 A>C
- Sequence
tggttgttgcaaagaggaagttaa[A/C]ctgaagtaacctaaaaatgtaaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) LNCaP (prostate carcinoma) K562 (myelogenous leukemia) SUP-B15 (Childhood B acute lymphoblastic leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.98 | 0.49 | 1.08 | |||
| LNCaP (prostate carcinoma) | -0.46 | 1.82 | 1.40 | |||
| K562 (myelogenous leukemia) | 0.32 | 0.73 | 1.02 | |||
| SUP-B15 (Childhood B acute lymphoblastic leukemia) | 2.42 | -1.96 | 1.00 |
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