rs384642 chr1:91165534 T>C

Sequence
ggagggaatttgtaacagcactca[T/C]gatgggatttttactattttagtt
ASB in cell types
foreskin keratinocyte
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte n/a 1.64 1.003.1·10-5 3.17
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  autism,  hypertension (early onset hypertension),  ldl cholesterol,  parkinsons disease,  resistance to kuru in aged women despite likely exposure,  total cholesterol,  triglycerides,  years of education
GTEx eQTL Thyroid

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