rs384810 chr17:77392730 G>T

Sequence
cctttggcaggtttgaactatctg[G/T]ctgcggctctctaaggagggagcg
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 1.87 -2.14 6.2·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height,  total cholesterol
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Skin_Not_Sun_Exposed_Suprapubic,  Testis

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