rs384905 chr2:196884429 A>T

Sequence
tatttgtttgataaacacaaggtc[A/T]catgaatgaatatgtacaaataag
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.18 0.18 6.6·10-41.00 2.25 -3.08 Concordant
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP birth weight,  diastolic blood pressure (dbp),  obesity with early age of onset (age >2),  rheumatoid arthritis
GTEx eQTL Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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