rs386274 chr20:56455025 C>A
- Sequence
gacagggctaaataggactgactc[C/A]gttcctctttgacattctgattta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia) CAR-T cells
- ASB for transcription factors
- SPI1_HUMAN MTA2_HUMAN NFAC3_HUMAN IRF4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -2.13 | 2.53 | 1.50 | 5.95 | Concordant | |||
| MTA2_HUMAN | -3.54 | 2.31 | 1.75 | n/a | n/a | |||
| NFAC3_HUMAN | -2.71 | 2.77 | 1.50 | n/a | No Hit | |||
| IRF4_HUMAN | -0.50 | 1.74 | 1.00 | 3.83 | Concordant |
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Motif analysis
