rs388296 chr21:44755449 C>T

Sequence
acgcaaatgcccctggatgcaacc[C/T]ccattctttgtacagcagctgggt
ASB in cell types
K562 (myelogenous leukemia) A-673 clone Asp114 (Ewing sarcoma)
ASB for transcription factors
GABP1_HUMAN FLI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN -3.13 3.38 1.001.5·10-5 1.00 n/a n/a
FLI1_HUMAN 0.80 1.72 1.000.01 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Skin_Sun_Exposed_Lower_leg

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