rs389508 chr12:29727017 G>C

Sequence
gcaggggtataactctgctgctct[G/C]tcctgatgaggctgagagcaactt
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -1.66 2.46 1.000.04 2.00 3.46 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GRASP aortic valve calcium,  hdl cholesterol,  ldl cholesterol,  total cholesterol

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