rs390657 chr13:112760771 A>G

Sequence
taaatatttattgctttgatctga[A/G]tttgataatcaaactgagatttaa
ASB in cell types
breast tumor
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.06 n/a 2.0·10-31.00 2.00 n/a No Hit
ANDR_HUMAN 2.96 0.54 0.011.00 1.55 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  fasting blood glucose,  homa-ir
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis

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