rs395239 chr5:40166462 G>A

Sequence
ttttttaaatgagctcccacaaat[G/A]agaaggaatcactgcaagaagtcc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) -0.47 1.30 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (geographic atrophy),  aortic valve calcium,  neuroticism,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Brain_Caudate_basal_ganglia

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