rs395417 chr6:24961435 T>C
- Sequence
caggggttgatgcatacagtgtaa[T/C]atggtgctccttgggtggctctga
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 3.00 | 2.00 | 5.30 | Concordant |
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Motif analysis
Genetic associations
GRASP homa-ir, hypertension (early onset hypertension), microalbuminuria, neuroblastoma (brain cancer), primary rhegmatogenous retinal detachment, triglycerides